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Journal of Computer Science & Systems Biology (JCSB)

Instructions for Authors

Journal of Computer Science & Systems Biology (JCSB) provides rapid publication (monthly) of articles in all areas of the subject. The Journal welcomes the submission of manuscripts that meet the general criteria of significance and scientific excellence. Papers will be published approximately one  month after acceptance.

Submit manuscripts as e-mail attachment to the Editorial Office at gsbsystemsbiology@gmail.com, systemsbiology@omicsonline.com. A manuscript number will be mailed to the corresponding author same day or within 72 hours.

The cover letter should include the corresponding author's full address and telephone/fax numbers and should be in an e-mail message sent to the Editor, with the file, whose name should begin with the first author's surname, as an attachment. The authors may also suggest two to four reviewers for the manuscript (Journal of Computer Science & Systems Biology may designate other reviewers). 

OMICS Publishing Group Policy Regarding the NIH Mandate

OMICS Publishing Group will support our authors by posting the published version of articles by NIH grant-holders to PubMed Central immediately after publication.  We encourage our authors, reviewers and editors to participate the NIH announcement on Request For Information (RFI) process.

The cover letter should include the corresponding author's full address and telephone/fax numbers and should be in an e-mail message sent to the Editor, with the file, whose name should begin with the first author's surname, as an attachment. The authors may also suggest three to four reviewers for the manuscript (Journal of Proteomics and Bioinformatics may designate other reviewers). 

Article Types

Research articles: These should describe new and carefully confirmed findings, and experimental procedures should be given in sufficient detail for others to verify the work. The length of a full paper should be the minimum required to describe and interpret the work clearly.

Reviews: Submissions of reviews and perspectives covering topics of current interest are welcome and encouraged. Reviews should be concise and no longer than 10-16 printed pages. Reviews are also peer-reviewed.

JCSB also accepts abstract", "addendum", "announcement", "article-commentary", "book-review", "books-received", "brief-report", "calendar", "case-report", "correction", "discussion", "editorial", "in-brief", "introduction ", "letter", "meeting-report", "news", "obituary", "oration ", "other", "product-review", "reply"

Review Process
All manuscripts are reviewed by an editor and members of the editorial board or qualified outside reviewers. Decisions will be made as rapidly as possible, and the journal strives to return reviewers’ comments to authors within a month. The editorial board will re-review manuscripts that are accepted pending revision. It is the goal of the Journal of Computer Science & Systems Biology to publish manuscripts within two to three months of initial submission.

Research articles
All portions of the manuscript must be typed double-spaced and all pages numbered starting from the title page.
The Title should be a brief phrase describing the contents of the paper. The Title Page should include the authors' full names and affiliations, the name of the corresponding author along with phone, fax and E-mail information. Present addresses of authors should appear as a footnote.


The Abstract should be informative and completely self-explanatory, briefly present the topic, state the scope of the experiments, indicate significant data, and point out major findings and conclusions. The Abstract should be 100 to 200 words in length.. Complete sentences, active verbs, and the third person should be used, and the abstract should be written in the past tense. Standard nomenclature should be used and abbreviations should be avoided. No literature should be cited.

Following the abstract, about 3 to 10 key words that will provide indexing references to should be listed.

A list of non-standard Abbreviations should be added. In general, non-standard abbreviations should be used only when the full term is very long and used often. Each abbreviation should be spelled out and introduced in parentheses the first time it is used in the text. Only recommended SI units should be used. Authors should use the solidus presentation (mg/ml). Standard abbreviations (such as ATP and DNA) need not be defined.

The Introduction should provide a clear statement of the problem, the relevant literature on the subject, and the proposed approach or solution. It should be understandable to colleagues from a broad range of scientific disciplines.

Materials and Methods should be complete enough to allow experiments to be reproduced. However, only truly new procedures should be described in detail; previously published procedures should be cited, and important modifications of published procedures should be mentioned briefly. Capitalize trade names and include the manufacturer's name and address. Subheadings should be used. Methods in general use need not be described in detail.

Results should be presented with clarity and precision. The results should be written in the past tense when describing findings in the authors' experiments. Previously published findings should be written in the present tense. Results should be explained, but largely without referring to the literature. Discussion, speculation and detailed interpretation of data should not be included in the Results but should be put into the Discussion section.

The Discussion should interpret the findings in view of the results obtained in this and in past studies on this topic. State the conclusions in a few sentences at the end of the paper. The Results and Discussion sections can include subheadings, and when appropriate, both sections can be combined.

The Acknowledgments of people, grants, funds, etc should be brief.

Tables should be kept to a minimum and be designed to be as simple as possible. Tables are to be typed double-spaced throughout, including headings and footnotes. Each table should be on a separate page, numbered consecutively in Arabic numerals and supplied with a heading and a legend. Tables should be self-explanatory without reference to the text. The details of the methods used in the experiments should preferably be described in the legend instead of in the text. The same data should not be presented in both table and graph form or repeated in the text.


Figure legends
should be typed in numerical order on a separate sheet. Graphics should be prepared using applications capable of generating high resolution GIF, TIFF, JPEG.

All images MUST be at or above intended display size, with the following image resolutions: Line Art 800 dpi, Combination (Line Art + Halftone) 600 dpi, Halftone 300 dpi. See the Image quality specifications chart for details. Image files also must be cropped as close to the actual image as possible.

Use Arabic numerals to designate figures and upper case letters for their parts (Figure 1). Begin each legend with a title and include sufficient description so that the figure is understandable without reading the text of the manuscript. Information given in legends should not be repeated in the text.

Tables and Equations as Graphics

If equations cannot be encoded in MathML, submit them in TIFF or EPS format as discrete files (i.e., a file containing only the data for one equation). Only when tables cannot be encoded as XML/SGML can they be submitted as graphics. If this method is used, it is critical that the font size in all equations and tables is consistent and legible throughout all submissions.

References: In the text, a reference identified by means of an author‘s name should be followed by the date of the reference in parentheses. When there are more than two authors, only the first author‘s name should be mentioned, followed by ’et al‘. In the event that an author cited has had two or more works published during the same year, the reference, both in the text and in the reference list, should be identified by a lower case letter like ’a‘ and ’b‘ after the date to distinguish the works.

Examples:

Richard (2000), Meyer et al. (2003), (Srivastav, 1983), (Baker and Nagy, 1992), (Srinubabu, 2006; Wang, 1987a,b; Smith, 1993,1995), (Beretta et al., 2001)
References should be listed at the end of the paper in alphabetical order. Articles in preparation or articles submitted for publication, unpublished observations, personal communications, etc. should not be included in the reference list but should only be mentioned in the article text (e.g, Roman A. Zubarav, Uppsala University, Sweden, personal communication). Journal names are abbreviated according to the practice of PUBMED. Authors are fully responsible for the accuracy of the references.

Examples:

Authors are requested to provide at least one online link for each reference as following (preferably pubmed).

Examples:

Simpson RJ (2003) Task imposed on prisons is impossible BMJ. 327:969–971. Find this article online

Srinubabu G, Ratnam BV, Rao AA, Rao MN (2008) Development and validation of LC-MS/MS method for the quantification of oxcarbazepine in human plasma using an experimental design. Chem Pharm Bull. 56:28-33.  Find this article online

Charnley AK (1992) Mechanisms of fungal pathogenesis in insects with particular reference to locusts. In: Lomer CJ, Prior C (eds) Biological Controls of Locusts and Grasshoppers: Proceedings of an international workshop held at Cotonou, Benin. Oxford: CAB International, pp 181-190.

Mundree SG, Farrant JM (2000) Some physiological and molecular insights into the mechanisms of desiccation tolerance in the resurrection plant Xerophyta viscasa Baker.  In Cherry et al. (eds) Plant tolerance to abiotic stresses in Agriculture: Role of Genetic Engineering, Kluwer Academic Publishers, Netherlands, pp 201-222.

Rao AA (2002) Interactions between Striga hermonthica (Del.) Benth. and fluorescent rhizosphere bacteria Of Zea mays, L. and Sorghum bicolor L. Moench for Striga suicidal germination In Vigna unguiculata . PhD dissertation, University of Pittsburgh, Pittsburgh, USA.

Proofs and Reprints: Electronic proofs will be sent (e-mail attachment) to the corresponding author as a PDF file.  Page proofs are considered to be the final version of the manuscript. With the exception of typographical or minor clerical errors, no changes will be made in the manuscript at the proof stage.  Authors will have free electronic access to the full text (in both HTML and PDF) of the article. Authors can freely download the PDF file from which they can print unlimited copies of their articles

Copyright: Submission of a manuscript implies: that the work described has not been published before (except in the form of an abstract or as part of a published lecture, or thesis) that it is not under consideration for publication elsewhere; that if and when the manuscript is accepted for publication.

All works published by OMICS Publishing Group are under the terms of the Creative Commons Attribution License. This permits anyone to copy, distribute, transmit and adapt the work provided the original work and source is appropriately cited.

Open access is a property of individual works, not necessarily journals or publishers.

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